Table 1: Databases containing information on gene-disease associations in more than one gene
Information on these or any other internet-based resources of gene-disease association data should be emailed to databases@hugenet.org.uk.
|
|
Name of Website |
Website URL |
Brief Description |
Summary |
Alzgene |
http://www.alzforum.org/res/com/gen/
alzgene |
Regularly updated collection of published genetic association studies performed on Alzheimer Disease phenotypes, from database searches and journals' contents lists. Case and control data presented. Performs crude meta-analysis of odds ratios on request. |
Alzgene Summary |
Cytokine Gene Polymorphism in Human Disease |
http://www.nanea.dk/cytokinesnps/ |
Regularly updated database with Medline-based records from a systematic review of cytokine gene polymorphisms associated with human disease. Data extracted from two publications about the study. |
Cytokine Gene Polymorphism in Human Disease Summary |
HuGE Navigator |
http://hugenavigator.net |
HuGE Navigator provides access to a continuously updated knowledge base in human genome epidemiology, including information on population prevalence of genetic variants, gene-disease associations, gene-gene and gene-environment interactions, and evaluation of genetic tests. |
HuGE Navigator Summary
|
GenAtlas |
http://www.genatlas.org |
Regularly updated database of genes, phenotypes and references. Among numerous databases are brief sections on disorders associated with genes, with lists of citations. May be biased towards statistically significant results. |
GenAtlas Summary |
GeneCanvas |
http://genecanvas.idf.inserm.fr |
Database of cardiovascular candidate genes and their polymorphisms investigated at INSERM (Paris, France). Data include gene frequencies and linkage disequilibrium statistics. |
GeneCanvas Summary |
Genetic Association Database |
http://geneticassociationdb.nih.gov |
Database of human genetic association studies of complex diseases and disorders, based on Medline records. Data extracted from publications. |
Genetic Association Database Summary |
Human Obesity Gene Map Database |
http://obesitygene.pbrc.edu |
Database of obesity-related genes, including P values for association and references. Biased in favour of statistically significant results. |
Human Obesity Gene Map Database Summary
|
Infevers |
http://fmf.igh.cnrs.fr/infevers |
Database of genetic associations in hereditary inflammatory disorders, with voluntarily submitted entries. Submissions are validated by an editorial board member. |
Infevers Summary |
MedGene |
http://medgene.med.harvard.edu/MEDGENE/ |
Automated database of gene disease association studies in Medline. |
MedGene Summary |
OMIM |
http://www.ncbi.nlm.nih.gov/omim/ |
Database of human genes and genetic disorders, containing textual information with links to Medline and sequence records in the Entrez system, and links to additional related resources at NCBI and elsewhere. |
OMIM Summary |
PharmGKB |
http://www.pharmgkb.org |
Database of genomic data and clinical information from participants in pharmacogenetics research studies. Welcomes submission of primary data. |
PharmGKB Summary |
T1DBase |
http://t1dbase.org/ |
Database of type 1 diabetes data, including information from collaborating laboratories. Some indication given of unpublished data. |
T1Dbase Summary |
